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Class: OMEZarrImageDataProvider

Defined in: @tissuumaps-storage/src/ome-zarr/OMEZarrImageDataProvider.ts:15

Data provider for raster images

Implements​

Constructors​

Constructor​

new OMEZarrImageDataProvider(): OMEZarrImageDataProvider

Returns​

OMEZarrImageDataProvider

Properties​

name​

readonly name: "OME-Zarr" = "OME-Zarr"

Defined in: @tissuumaps-storage/src/ome-zarr/OMEZarrImageDataProvider.ts:20

The name of the data provider

Implementation of​

ImageDataProvider.name

schema​

readonly schema: object

Defined in: @tissuumaps-storage/src/ome-zarr/OMEZarrImageDataProvider.ts:22

The JSON schema for the data source

properties​

properties: object

properties.sizeC​

sizeC: object

properties.sizeC.type​

type: string = "integer"

properties.t​

t: object

properties.t.type​

type: string = "integer"

properties.url​

url: object

properties.url.type​

type: string = "string"

properties.z​

z: object

properties.z.type​

type: string = "integer"

required​

required: string[]

type​

type: string = "object"

Implementation of​

ImageDataProvider.schema

uischema​

readonly uischema: object

Defined in: @tissuumaps-storage/src/ome-zarr/OMEZarrImageDataProvider.ts:42

The JSON Forms UI schema for the data source

elements​

elements: object[]

type​

type: string = "VerticalLayout"

Implementation of​

ImageDataProvider.uischema

Methods​

load()​

load(normalizedDataSource, options?): Promise<OMEZarrImageData>

Defined in: @tissuumaps-storage/src/ome-zarr/OMEZarrImageDataProvider.ts:80

Opens a data source and returns the loaded data accessor

The data source has to have been normalized by DataProvider.normalize beforehand.

Parameters​

normalizedDataSource​

NormalizedOMEZarrImageDataSource

The normalized data source to open

options?​

DataProviderLoadOptions

See DataProviderLoadOptions

Returns​

Promise<OMEZarrImageData>

A promise that resolves to the loaded data accessor

Implementation of​

ImageDataProvider.load

normalize()​

normalize(dataSource, projectUrl): NormalizedOMEZarrImageDataSource

Defined in: @tissuumaps-storage/src/ome-zarr/OMEZarrImageDataProvider.ts:69

Returns the data source with all of this data provider's defaults applied and all of its relative URLs resolved

Data sources that normalize to the same value are considered equal, and their data is loaded only once and shared between all referencing objects. Normalization has to be idempotent: normalizing an already normalized data source must return the same value again.

Relative URLs are resolved against the URL the project was loaded from, and against the document base URL for projects without one.

Parameters​

dataSource​

OMEZarrImageDataSource

The data source to normalize

projectUrl​

string | null

The absolute URL of the project, or null for projects that were not loaded from a URL

Returns​

NormalizedOMEZarrImageDataSource

The normalized data source

Implementation of​

ImageDataProvider.normalize