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Interface: OMEZarrImageDataSource

Defined in: @tissuumaps-storage/src/ome-zarr/OMEZarrImageDataSource.ts:26

Data source for OME-Zarr images

The source refers to a remote OME-Zarr store (a URL), a remote zipped OME-Zarr file (a URL with the zipped OME-Zarr extension, in any case, see OMEZarrUtils.isZipSource), or an OME-Zarr store (a directory) or zipped OME-Zarr file in the open workspace (a workspace-relative or project-relative path).

Images with a channel axis (even one of length one) are opened as multi-channel image data with one tile source per channel; images without a channel axis as single-channel image data.

Images with a z or t axis are opened as a single plane: z and t select the plane, and default to the image's omero defaults (or to the middle of the axis without them).

Extends​

Properties​

source​

source: string

Defined in: @tissuumaps-storage/src/ome-zarr/OMEZarrImageDataSource.ts:30

URL or path of the OME-Zarr image (see SourceUtils)

Overrides​

ImageDataSource.source

t?​

optional t?: number

Defined in: @tissuumaps-storage/src/ome-zarr/OMEZarrImageDataSource.ts:33

Timepoint index (0-based) to open, for images with a t axis

type​

type: "ome-zarr"

Defined in: @tissuumaps-core/build/src/model/base.d.ts:171

Data source type

Inherited from​

ImageDataSource.type

z?​

optional z?: number

Defined in: @tissuumaps-storage/src/ome-zarr/OMEZarrImageDataSource.ts:36

Z-slice index (0-based) to open, for images with a z axis