TissUUmaps is a browser-based tool for fast visualization and exploration of millions of data points overlaying a tissue sample. TissUUmaps can be used as a web service or locally in your computer, and allows users to share regions of interest and local statistics.
Download the Windows Installer from the last release and install it. Note that the installer is not signed yet and may trigger warnings from the browser and from the firewall. You can safely pass these warnings.
PIP installation (for Linux and Mac)¶
libvipsfor your system: https://www.libvips.org/install.html
An easy way to install
libvipsis to use an Anaconda environment with
conda create -y -n tissuumaps_env -c conda-forge python=3.9 libvips conda activate tissuumaps_env
Install the TissUUmaps library using
pip install "TissUUmaps[full]"
Start the TissUUmaps user interface:
Or start TissUUmaps as a local server:
And open http://127.0.0.1:5000/ in your favorite browser.